Gene regulatory networks govern the function of key cellular processes, such as control of the cell cycle, response to stress, DNA repair mechanisms, and more. Boolean networks have been used successfully in modeling gene regulatory networks. In the …
This paper is concerned with optimal estimation of the state of a Boolean dynamical systems observed through correlated noisy Boolean measurements. The optimal Minimum Mean-Square Error (MMSE) state estimator for general Partially-Observed Boolean …
The BoolFilter package provides tools for state estimation and inference of partially-observed Boolean dynamical systems. This package contains functions for simulating data, obtaining the optimal estimator in the presence of various observation …